Publications
Selected Publications:
Ziaei, Navid, Behzad Nazari, Uri T. Eden, Alik Widge, and Ali Yousefi. “A Bayesian Gaussian Process-Based Latent Discriminative Generative Decoder (LDGD) Model for High-Dimensional Data.” IEEE Access (2024).
Basu, Ishita, Ali Yousefi, Britni Crocker, Rina Zelmann, Angelique C. Paulk, Noam Peled, Kristen K. Ellard et al. “Closed-loop enhancement and neural decoding of cognitive control in humans.” Nature biomedical engineering 7, no. 4 (2023): 576-588.
Yousefi, Ali, Ishita Basu, Angelique C. Paulk, Noam Peled, Emad N. Eskandar, Darin D. Dougherty, Sydney S. Cash, Alik S. Widge, and Uri T. Eden. “Decoding hidden cognitive states from behavior and physiology using a Bayesian approach.” Neural computation 31, no. 9 (2019): 1751-1788.
Yousefi, Ali, Anna K. Gillespie, Jennifer A. Guidera, Mattias Karlsson, Loren M. Frank, and Uri T. Eden. “Efficient decoding of multi-dimensional signals from population spiking activity using a Gaussian mixture particle filter.” IEEE Transactions on Biomedical Engineering 66, no. 12 (2019): 3486-3498.
Yousefi, Ali, Ishita Basu, Angelique C. Paulk, Noam Peled, Emad N. Eskandar, Darin D. Dougherty, Sydney S. Cash, Alik S. Widge, and Uri T. Eden. “Decoding hidden cognitive states from behavior and physiology using a Bayesian approach.” Neural computation 31, no. 9 (2019): 1751-1788.
Yousefi, Ali, Yalda Amidi, Behzad Nazari, and Uri T. Eden. “Assessing goodness-of-fit in marked point process models of neural population coding via time and rate rescaling.” Neural computation 32, no. 11 (2020): 2145-2186.
Yousefi, Ali, Angelique C. Paulk, Ishita Basu, Jonathan L. Mirsky, Darin D. Dougherty, Emad N. Eskandar, Uri T. Eden, and Alik S. Widge. “COMPASS: an open-source, general-purpose software toolkit for computational psychiatry.” Frontiers in neuroscience 12 (2019): 957.
Book Chapter:
Handbook of Neuroengineering: State Space Models for Spike Data
Google Scholar: https://scholar.google.com/citations?user=jieyeRUAAAAJ